Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Gm29257-201ENSMUST00000186115 639 ntBASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd1Q6PIP5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd1Q6PIP5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.42■□□□□ 0.7
Nudcd1Q6PIP5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd1Q6PIP5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Gm12933-201ENSMUST00000120203 872 ntBASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd1Q6PIP5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd1Q6PIP5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd1Q6PIP5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nudcd1Q6PIP5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd1Q6PIP5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd1Q6PIP5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.39■□□□□ 0.7
Nudcd1Q6PIP5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd1Q6PIP5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.38■□□□□ 0.69
Nudcd1Q6PIP5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd1Q6PIP5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nudcd1Q6PIP5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nudcd1Q6PIP5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd1Q6PIP5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd1Q6PIP5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd1Q6PIP5 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nudcd1Q6PIP5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd1Q6PIP5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms