Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim45Q6PFY8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim45Q6PFY8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim45Q6PFY8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.17■□□□□ 0.5
Trim45Q6PFY8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim45Q6PFY8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim45Q6PFY8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trim45Q6PFY8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim45Q6PFY8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim45Q6PFY8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim45Q6PFY8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim45Q6PFY8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim45Q6PFY8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim45Q6PFY8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.12■□□□□ 0.49
Trim45Q6PFY8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim45Q6PFY8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms