Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scaf4Q6PFF0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scaf4Q6PFF0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Scaf4Q6PFF0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scaf4Q6PFF0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scaf4Q6PFF0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scaf4Q6PFF0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scaf4Q6PFF0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.01■□□□□ 0.63
Scaf4Q6PFF0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Fam105a-203ENSMUST00000226170 3043 ntBASIC19■□□□□ 0.63
Scaf4Q6PFF0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Scaf4Q6PFF0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf4Q6PFF0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf4Q6PFF0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf4Q6PFF0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf4Q6PFF0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf4Q6PFF0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf4Q6PFF0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf4Q6PFF0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms