Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dhx40Q6PE54 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Dhx40Q6PE54 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dhx40Q6PE54 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Gm22238-201ENSMUST00000175222 88 ntBASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dhx40Q6PE54 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Dhx40Q6PE54 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Dhx40Q6PE54 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Dhx40Q6PE54 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Dhx40Q6PE54 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Dhx40Q6PE54 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.41■■□□□ 1.02
Dhx40Q6PE54 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dhx40Q6PE54 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.4■■□□□ 1.02
Dhx40Q6PE54 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Dhx40Q6PE54 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Dhx40Q6PE54 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dhx40Q6PE54 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Dhx40Q6PE54 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Dhx40Q6PE54 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Dhx40Q6PE54 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Dhx40Q6PE54 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Dhx40Q6PE54 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.39■■□□□ 1.01
Dhx40Q6PE54 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Dhx40Q6PE54 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms