Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Golph3-205ENSMUST00000228671 2842 ntBASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Pcdhga7Q6DD96 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga7Q6DD96 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga7Q6DD96 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.6■□□□□ 0.57
Pcdhga7Q6DD96 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga7Q6DD96 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga7Q6DD96 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.58■□□□□ 0.56
Pcdhga7Q6DD96 Serp2-204ENSMUST00000228055 705 ntBASIC18.58■□□□□ 0.56
Pcdhga7Q6DD96 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga7Q6DD96 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhga7Q6DD96 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhga7Q6DD96 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms