Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six3Q62233 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six3Q62233 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Six3Q62233 Serp2-204ENSMUST00000228055 705 ntBASIC18.83■□□□□ 0.6
Six3Q62233 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six3Q62233 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six3Q62233 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Six3Q62233 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.82■□□□□ 0.6
Six3Q62233 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six3Q62233 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.81■□□□□ 0.6
Six3Q62233 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
Six3Q62233 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.81■□□□□ 0.6
Six3Q62233 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six3Q62233 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six3Q62233 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six3Q62233 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six3Q62233 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.8■□□□□ 0.6
Six3Q62233 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six3Q62233 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.8■□□□□ 0.6
Six3Q62233 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six3Q62233 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Six3Q62233 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.8■□□□□ 0.6
Six3Q62233 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Six3Q62233 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Six3Q62233 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six3Q62233 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Six3Q62233 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.79■□□□□ 0.6
Six3Q62233 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.79■□□□□ 0.6
Six3Q62233 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.79■□□□□ 0.6
Six3Q62233 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.79■□□□□ 0.6
Six3Q62233 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.79■□□□□ 0.6
Six3Q62233 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.79■□□□□ 0.6
Six3Q62233 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six3Q62233 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.78■□□□□ 0.6
Six3Q62233 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six3Q62233 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Six3Q62233 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Six3Q62233 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Six3Q62233 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six3Q62233 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six3Q62233 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Six3Q62233 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six3Q62233 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six3Q62233 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six3Q62233 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six3Q62233 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Six3Q62233 Gm43137-201ENSMUST00000198052 594 ntBASIC18.77■□□□□ 0.6
Six3Q62233 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.77■□□□□ 0.6
Six3Q62233 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.77■□□□□ 0.6
Six3Q62233 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six3Q62233 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Six3Q62233 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Six3Q62233 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six3Q62233 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Six3Q62233 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Six3Q62233 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Six3Q62233 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.76■□□□□ 0.59
Six3Q62233 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.76■□□□□ 0.59
Six3Q62233 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Six3Q62233 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six3Q62233 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.75■□□□□ 0.59
Six3Q62233 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.75■□□□□ 0.59
Six3Q62233 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms