Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd53Q61451 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd53Q61451 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Cd53Q61451 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd53Q61451 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.69■□□□□ 0.42
Cd53Q61451 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.69■□□□□ 0.42
Cd53Q61451 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.69■□□□□ 0.42
Cd53Q61451 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cd53Q61451 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.69■□□□□ 0.42
Cd53Q61451 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cd53Q61451 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cd53Q61451 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd53Q61451 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd53Q61451 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd53Q61451 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd53Q61451 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.68■□□□□ 0.42
Cd53Q61451 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.68■□□□□ 0.42
Cd53Q61451 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.68■□□□□ 0.42
Cd53Q61451 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd53Q61451 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cd53Q61451 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Cd53Q61451 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cd53Q61451 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.67■□□□□ 0.42
Cd53Q61451 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.67■□□□□ 0.42
Cd53Q61451 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Gm6139-201ENSMUST00000079261 882 ntBASIC17.67■□□□□ 0.42
Cd53Q61451 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cd53Q61451 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd53Q61451 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.67■□□□□ 0.42
Cd53Q61451 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
Cd53Q61451 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cd53Q61451 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Golph3-205ENSMUST00000228671 2842 ntBASIC17.66■□□□□ 0.42
Cd53Q61451 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd53Q61451 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.65■□□□□ 0.42
Cd53Q61451 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cd53Q61451 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Cd53Q61451 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.65■□□□□ 0.42
Cd53Q61451 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Gm9870-201ENSMUST00000063874 645 ntBASIC17.65■□□□□ 0.42
Cd53Q61451 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd53Q61451 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cd53Q61451 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd53Q61451 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd53Q61451 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Cd53Q61451 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd53Q61451 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cd53Q61451 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd53Q61451 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd53Q61451 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd53Q61451 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Cd53Q61451 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd53Q61451 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cd53Q61451 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd53Q61451 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cd53Q61451 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.63■□□□□ 0.41
Cd53Q61451 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd53Q61451 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd53Q61451 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd53Q61451 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd53Q61451 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd53Q61451 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Cd53Q61451 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Cd53Q61451 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd53Q61451 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd53Q61451 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd53Q61451 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cd53Q61451 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cd53Q61451 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd53Q61451 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd53Q61451 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cd53Q61451 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms