Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Clcn4Q61418 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn4Q61418 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clcn4Q61418 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn4Q61418 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn4Q61418 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn4Q61418 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clcn4Q61418 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn4Q61418 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn4Q61418 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clcn4Q61418 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Clcn4Q61418 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.67■□□□□ 0.42
Clcn4Q61418 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clcn4Q61418 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.67■□□□□ 0.42
Clcn4Q61418 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn4Q61418 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Clcn4Q61418 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.66■□□□□ 0.42
Clcn4Q61418 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Clcn4Q61418 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
Clcn4Q61418 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn4Q61418 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn4Q61418 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn4Q61418 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.65■□□□□ 0.42
Clcn4Q61418 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clcn4Q61418 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.65■□□□□ 0.42
Clcn4Q61418 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn4Q61418 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Clcn4Q61418 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clcn4Q61418 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clcn4Q61418 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Clcn4Q61418 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clcn4Q61418 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn4Q61418 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn4Q61418 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn4Q61418 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Clcn4Q61418 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.64■□□□□ 0.41
Clcn4Q61418 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn4Q61418 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn4Q61418 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn4Q61418 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Clcn4Q61418 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Clcn4Q61418 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn4Q61418 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn4Q61418 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn4Q61418 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn4Q61418 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Clcn4Q61418 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn4Q61418 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn4Q61418 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn4Q61418 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Clcn4Q61418 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.61■□□□□ 0.41
Clcn4Q61418 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcn4Q61418 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Clcn4Q61418 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.61■□□□□ 0.41
Clcn4Q61418 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn4Q61418 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms