Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1eQ61290 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Cacna1eQ61290 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Trmt13-210ENSMUST00000198454 880 ntBASIC19.1■□□□□ 0.65
Cacna1eQ61290 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1eQ61290 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.09■□□□□ 0.65
Cacna1eQ61290 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1eQ61290 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1eQ61290 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.08■□□□□ 0.65
Cacna1eQ61290 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1eQ61290 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.08■□□□□ 0.65
Cacna1eQ61290 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1eQ61290 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1eQ61290 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1eQ61290 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cacna1eQ61290 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1eQ61290 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Gm8520-201ENSMUST00000186517 868 ntBASIC19.07■□□□□ 0.64
Cacna1eQ61290 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.07■□□□□ 0.64
Cacna1eQ61290 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cacna1eQ61290 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1eQ61290 Gm10252-201ENSMUST00000209541 832 ntBASIC19.07■□□□□ 0.64
Cacna1eQ61290 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1eQ61290 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cacna1eQ61290 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.05■□□□□ 0.64
Cacna1eQ61290 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms