Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptch1Q61115 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC28.32■■■□□ 2.12
Ptch1Q61115 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ptch1Q61115 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ptch1Q61115 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC28.31■■■□□ 2.12
Ptch1Q61115 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ptch1Q61115 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ptch1Q61115 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ptch1Q61115 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ptch1Q61115 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ptch1Q61115 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ptch1Q61115 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ptch1Q61115 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ptch1Q61115 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Ptch1Q61115 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC28.29■■■□□ 2.12
Ptch1Q61115 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ptch1Q61115 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC28.29■■■□□ 2.12
Ptch1Q61115 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
Ptch1Q61115 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC28.29■■■□□ 2.12
Ptch1Q61115 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ptch1Q61115 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ptch1Q61115 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC28.28■■■□□ 2.12
Ptch1Q61115 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC28.28■■■□□ 2.12
Ptch1Q61115 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ptch1Q61115 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ptch1Q61115 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ptch1Q61115 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ptch1Q61115 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Mir1199-201ENSMUST00000117015 119 ntBASIC28.27■■■□□ 2.12
Ptch1Q61115 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Ptch1Q61115 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Gm9987-201ENSMUST00000069768 567 ntBASIC28.27■■■□□ 2.12
Ptch1Q61115 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptch1Q61115 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Ptch1Q61115 AC121577.1-201ENSMUST00000227302 707 ntBASIC28.26■■■□□ 2.12
Ptch1Q61115 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Ptch1Q61115 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Ptch1Q61115 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ptch1Q61115 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ptch1Q61115 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ptch1Q61115 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ptch1Q61115 Gm18666-201ENSMUST00000190039 958 ntBASIC28.26■■■□□ 2.11
Ptch1Q61115 AC153881.2-201ENSMUST00000214877 204 ntBASIC28.26■■■□□ 2.11
Ptch1Q61115 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
Ptch1Q61115 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Ptch1Q61115 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ptch1Q61115 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ptch1Q61115 Gm6802-201ENSMUST00000167843 1983 ntBASIC28.25■■■□□ 2.11
Ptch1Q61115 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ptch1Q61115 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Ptch1Q61115 Nrn1-203ENSMUST00000223611 1443 ntBASIC28.24■■■□□ 2.11
Ptch1Q61115 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ptch1Q61115 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC28.24■■■□□ 2.11
Ptch1Q61115 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC28.24■■■□□ 2.11
Ptch1Q61115 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ptch1Q61115 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Ptch1Q61115 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC28.23■■■□□ 2.11
Ptch1Q61115 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC28.23■■■□□ 2.11
Ptch1Q61115 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ptch1Q61115 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ptch1Q61115 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ptch1Q61115 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
Ptch1Q61115 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ptch1Q61115 Cdkn3-203ENSMUST00000227149 1952 ntBASIC28.23■■■□□ 2.11
Ptch1Q61115 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC28.23■■■□□ 2.11
Ptch1Q61115 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptch1Q61115 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptch1Q61115 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptch1Q61115 Gm2399-201ENSMUST00000104944 225 ntBASIC28.22■■■□□ 2.11
Ptch1Q61115 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptch1Q61115 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptch1Q61115 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC28.21■■■□□ 2.11
Ptch1Q61115 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Ptch1Q61115 Gm20472-201ENSMUST00000174403 1240 ntBASIC28.21■■■□□ 2.11
Ptch1Q61115 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Ptch1Q61115 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC28.21■■■□□ 2.11
Ptch1Q61115 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptch1Q61115 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptch1Q61115 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptch1Q61115 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptch1Q61115 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Ptch1Q61115 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Ptch1Q61115 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Ptch1Q61115 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Ptch1Q61115 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ptch1Q61115 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ptch1Q61115 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
Ptch1Q61115 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Ptch1Q61115 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Ptch1Q61115 Gm44549-201ENSMUST00000208351 577 ntBASIC28.19■■■□□ 2.1
Ptch1Q61115 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Ptch1Q61115 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptch1Q61115 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Ptch1Q61115 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptch1Q61115 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms