Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd3Q61060 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.61■□□□□ 0.41
Foxd3Q61060 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.61■□□□□ 0.41
Foxd3Q61060 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd3Q61060 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.6■□□□□ 0.41
Foxd3Q61060 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.6■□□□□ 0.41
Foxd3Q61060 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.6■□□□□ 0.41
Foxd3Q61060 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxd3Q61060 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Foxd3Q61060 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxd3Q61060 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Foxd3Q61060 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxd3Q61060 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.59■□□□□ 0.41
Foxd3Q61060 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Foxd3Q61060 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Foxd3Q61060 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxd3Q61060 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxd3Q61060 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxd3Q61060 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Foxd3Q61060 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxd3Q61060 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Foxd3Q61060 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.58■□□□□ 0.4
Foxd3Q61060 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.58■□□□□ 0.4
Foxd3Q61060 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Foxd3Q61060 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.58■□□□□ 0.4
Foxd3Q61060 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxd3Q61060 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Foxd3Q61060 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.57■□□□□ 0.4
Foxd3Q61060 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.57■□□□□ 0.4
Foxd3Q61060 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Foxd3Q61060 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Foxd3Q61060 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Foxd3Q61060 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxd3Q61060 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Foxd3Q61060 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Foxd3Q61060 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Foxd3Q61060 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.56■□□□□ 0.4
Foxd3Q61060 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxd3Q61060 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Foxd3Q61060 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 AA386476-201ENSMUST00000098781 1665 ntBASIC17.55■□□□□ 0.4
Foxd3Q61060 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Foxd3Q61060 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.55■□□□□ 0.4
Foxd3Q61060 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Foxd3Q61060 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.55■□□□□ 0.4
Foxd3Q61060 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Foxd3Q61060 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxd3Q61060 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Foxd3Q61060 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.54■□□□□ 0.4
Foxd3Q61060 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Foxd3Q61060 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.54■□□□□ 0.4
Foxd3Q61060 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms