Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scarb1Q61009 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scarb1Q61009 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scarb1Q61009 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scarb1Q61009 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scarb1Q61009 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scarb1Q61009 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.21■□□□□ 0.19
Scarb1Q61009 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.21■□□□□ 0.19
Scarb1Q61009 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scarb1Q61009 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scarb1Q61009 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Scarb1Q61009 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scarb1Q61009 Grk6-206ENSMUST00000224995 2971 ntBASIC16.2■□□□□ 0.18
Scarb1Q61009 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scarb1Q61009 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.2■□□□□ 0.18
Scarb1Q61009 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.2■□□□□ 0.18
Scarb1Q61009 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scarb1Q61009 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scarb1Q61009 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scarb1Q61009 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scarb1Q61009 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scarb1Q61009 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.19■□□□□ 0.18
Scarb1Q61009 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Scarb1Q61009 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scarb1Q61009 Mir6236-201ENSMUST00000184437 123 ntBASIC16.19■□□□□ 0.18
Scarb1Q61009 Gm10232-201ENSMUST00000089221 720 ntBASIC16.19■□□□□ 0.18
Scarb1Q61009 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Scarb1Q61009 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scarb1Q61009 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scarb1Q61009 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scarb1Q61009 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.18■□□□□ 0.18
Scarb1Q61009 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scarb1Q61009 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Gm5921-201ENSMUST00000075898 882 ntBASIC16.18■□□□□ 0.18
Scarb1Q61009 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scarb1Q61009 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Scarb1Q61009 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scarb1Q61009 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scarb1Q61009 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.17■□□□□ 0.18
Scarb1Q61009 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Scarb1Q61009 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Scarb1Q61009 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.17■□□□□ 0.18
Scarb1Q61009 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scarb1Q61009 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Scarb1Q61009 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scarb1Q61009 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scarb1Q61009 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
Scarb1Q61009 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scarb1Q61009 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.16■□□□□ 0.18
Scarb1Q61009 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms