Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.91■□□□□ 0.78
Satb1Q60611 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Satb1Q60611 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Gm20049-201ENSMUST00000219950 730 ntBASIC19.9■□□□□ 0.78
Satb1Q60611 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Satb1Q60611 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
Satb1Q60611 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.89■□□□□ 0.77
Satb1Q60611 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Satb1Q60611 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.89■□□□□ 0.77
Satb1Q60611 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Satb1Q60611 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Satb1Q60611 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Satb1Q60611 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Satb1Q60611 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Satb1Q60611 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Satb1Q60611 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Satb1Q60611 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Satb1Q60611 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Satb1Q60611 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Satb1Q60611 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Satb1Q60611 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Satb1Q60611 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Satb1Q60611 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.87■□□□□ 0.77
Satb1Q60611 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Satb1Q60611 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Satb1Q60611 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.86■□□□□ 0.77
Satb1Q60611 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Satb1Q60611 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Satb1Q60611 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Satb1Q60611 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.85■□□□□ 0.77
Satb1Q60611 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Satb1Q60611 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Satb1Q60611 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Satb1Q60611 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.85■□□□□ 0.77
Satb1Q60611 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Satb1Q60611 Gm13148-201ENSMUST00000118892 745 ntBASIC19.84■□□□□ 0.77
Satb1Q60611 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.84■□□□□ 0.77
Satb1Q60611 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Satb1Q60611 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Satb1Q60611 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Satb1Q60611 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Satb1Q60611 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Satb1Q60611 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Satb1Q60611 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.83■□□□□ 0.77
Satb1Q60611 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Satb1Q60611 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.83■□□□□ 0.77
Satb1Q60611 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.83■□□□□ 0.77
Satb1Q60611 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Satb1Q60611 Gm37856-201ENSMUST00000191634 999 ntBASIC19.83■□□□□ 0.77
Satb1Q60611 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.83■□□□□ 0.77
Satb1Q60611 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.83■□□□□ 0.77
Satb1Q60611 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Satb1Q60611 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Satb1Q60611 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Satb1Q60611 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Satb1Q60611 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.82■□□□□ 0.76
Satb1Q60611 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Satb1Q60611 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.82■□□□□ 0.76
Satb1Q60611 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Satb1Q60611 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.82■□□□□ 0.76
Satb1Q60611 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Satb1Q60611 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Satb1Q60611 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms