Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr3Q5U430 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr3Q5U430 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.87■■□□□ 1.41
Ubr3Q5U430 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ubr3Q5U430 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr3Q5U430 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr3Q5U430 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr3Q5U430 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.87■■□□□ 1.41
Ubr3Q5U430 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.87■■□□□ 1.41
Ubr3Q5U430 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.86■■□□□ 1.41
Ubr3Q5U430 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr3Q5U430 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
Ubr3Q5U430 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr3Q5U430 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr3Q5U430 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr3Q5U430 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr3Q5U430 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr3Q5U430 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ubr3Q5U430 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.85■■□□□ 1.41
Ubr3Q5U430 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr3Q5U430 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr3Q5U430 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr3Q5U430 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr3Q5U430 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.85■■□□□ 1.41
Ubr3Q5U430 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr3Q5U430 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr3Q5U430 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr3Q5U430 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ubr3Q5U430 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr3Q5U430 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr3Q5U430 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
Ubr3Q5U430 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ubr3Q5U430 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ubr3Q5U430 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.83■■□□□ 1.41
Ubr3Q5U430 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ubr3Q5U430 Gm11249-201ENSMUST00000117071 859 ntBASIC23.83■■□□□ 1.4
Ubr3Q5U430 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ubr3Q5U430 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ubr3Q5U430 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ubr3Q5U430 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ubr3Q5U430 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Ubr3Q5U430 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ubr3Q5U430 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Ubr3Q5U430 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ubr3Q5U430 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ubr3Q5U430 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Ubr3Q5U430 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ubr3Q5U430 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ubr3Q5U430 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ubr3Q5U430 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.79■■□□□ 1.4
Ubr3Q5U430 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.79■■□□□ 1.4
Ubr3Q5U430 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ubr3Q5U430 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ubr3Q5U430 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ubr3Q5U430 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ubr3Q5U430 Mir1199-201ENSMUST00000117015 119 ntBASIC23.78■■□□□ 1.4
Ubr3Q5U430 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ubr3Q5U430 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ubr3Q5U430 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Gm2399-201ENSMUST00000104944 225 ntBASIC23.77■■□□□ 1.4
Ubr3Q5U430 Gm11643-201ENSMUST00000119578 864 ntBASIC23.77■■□□□ 1.4
Ubr3Q5U430 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ubr3Q5U430 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms