Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-1Q5R1I8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-1Q5R1I8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trav3-1Q5R1I8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav3-1Q5R1I8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.15□□□□□ -0.31
Trav3-1Q5R1I8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3-1Q5R1I8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Trav3-1Q5R1I8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trav3-1Q5R1I8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-1Q5R1I8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-1Q5R1I8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-1Q5R1I8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms