Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Serp2-204ENSMUST00000228055 705 ntBASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5d-4Q5R1F6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Gm12251-201ENSMUST00000117893 792 ntBASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trav5d-4Q5R1F6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav5d-4Q5R1F6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5d-4Q5R1F6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5d-4Q5R1F6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Mir7075-201ENSMUST00000184187 82 ntBASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5d-4Q5R1F6 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5d-4Q5R1F6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Gm12821-201ENSMUST00000120022 600 ntBASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms