Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Urb1Q571H0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Urb1Q571H0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Urb1Q571H0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Urb1Q571H0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Urb1Q571H0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Urb1Q571H0 Gm13534-201ENSMUST00000121169 513 ntBASIC17.73■□□□□ 0.43
Urb1Q571H0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Urb1Q571H0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.73■□□□□ 0.43
Urb1Q571H0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.72■□□□□ 0.43
Urb1Q571H0 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.72■□□□□ 0.43
Urb1Q571H0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Urb1Q571H0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.72■□□□□ 0.43
Urb1Q571H0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Urb1Q571H0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Urb1Q571H0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.71■□□□□ 0.43
Urb1Q571H0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.71■□□□□ 0.43
Urb1Q571H0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.71■□□□□ 0.43
Urb1Q571H0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Urb1Q571H0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Urb1Q571H0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
Urb1Q571H0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.7■□□□□ 0.42
Urb1Q571H0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.7■□□□□ 0.42
Urb1Q571H0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Urb1Q571H0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Urb1Q571H0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.69■□□□□ 0.42
Urb1Q571H0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Urb1Q571H0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.69■□□□□ 0.42
Urb1Q571H0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.69■□□□□ 0.42
Urb1Q571H0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.69■□□□□ 0.42
Urb1Q571H0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.69■□□□□ 0.42
Urb1Q571H0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.69■□□□□ 0.42
Urb1Q571H0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Urb1Q571H0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.69■□□□□ 0.42
Urb1Q571H0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Urb1Q571H0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Gm5643-201ENSMUST00000117081 966 ntBASIC17.68■□□□□ 0.42
Urb1Q571H0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.68■□□□□ 0.42
Urb1Q571H0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Urb1Q571H0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Urb1Q571H0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Urb1Q571H0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Urb1Q571H0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Urb1Q571H0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms