Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtl6Q505G4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl6Q505G4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl6Q505G4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl6Q505G4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl6Q505G4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl6Q505G4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.39■□□□□ 0.21
Rtl6Q505G4 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.39■□□□□ 0.21
Rtl6Q505G4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Gm8495-201ENSMUST00000188740 694 ntBASIC16.39■□□□□ 0.21
Rtl6Q505G4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Rtl6Q505G4 AA386476-201ENSMUST00000098781 1665 ntBASIC16.39■□□□□ 0.21
Rtl6Q505G4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl6Q505G4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Gm5874-201ENSMUST00000096101 508 ntBASIC16.38■□□□□ 0.21
Rtl6Q505G4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl6Q505G4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.37■□□□□ 0.21
Rtl6Q505G4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl6Q505G4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Rtl6Q505G4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Gm10493-201ENSMUST00000097270 612 ntBASIC16.35■□□□□ 0.21
Rtl6Q505G4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.35■□□□□ 0.21
Rtl6Q505G4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl6Q505G4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rtl6Q505G4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms