Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rc3h1Q4VGL6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Rc3h1Q4VGL6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Rc3h1Q4VGL6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rc3h1Q4VGL6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rc3h1Q4VGL6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rc3h1Q4VGL6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Rc3h1Q4VGL6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rc3h1Q4VGL6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rc3h1Q4VGL6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rc3h1Q4VGL6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rc3h1Q4VGL6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Gm7860-201ENSMUST00000121190 879 ntBASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rc3h1Q4VGL6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rc3h1Q4VGL6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rc3h1Q4VGL6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Rc3h1Q4VGL6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.33■■□□□ 1.17
Rc3h1Q4VGL6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.33■■□□□ 1.17
Rc3h1Q4VGL6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rc3h1Q4VGL6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rc3h1Q4VGL6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rc3h1Q4VGL6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rc3h1Q4VGL6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rc3h1Q4VGL6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rc3h1Q4VGL6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rc3h1Q4VGL6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rc3h1Q4VGL6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rc3h1Q4VGL6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Gm13534-201ENSMUST00000121169 513 ntBASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rc3h1Q4VGL6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rc3h1Q4VGL6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rc3h1Q4VGL6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.29■■□□□ 1.16
Rc3h1Q4VGL6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Rc3h1Q4VGL6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Rc3h1Q4VGL6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Rc3h1Q4VGL6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rc3h1Q4VGL6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms