Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.78■□□□□ 0.76
Trim80Q3V061 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim80Q3V061 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.78■□□□□ 0.76
Trim80Q3V061 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim80Q3V061 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Trim80Q3V061 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim80Q3V061 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim80Q3V061 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim80Q3V061 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Trim80Q3V061 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim80Q3V061 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.76■□□□□ 0.75
Trim80Q3V061 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim80Q3V061 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim80Q3V061 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim80Q3V061 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Trim80Q3V061 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim80Q3V061 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim80Q3V061 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim80Q3V061 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim80Q3V061 Gm45417-201ENSMUST00000209533 758 ntBASIC19.74■□□□□ 0.75
Trim80Q3V061 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim80Q3V061 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim80Q3V061 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim80Q3V061 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim80Q3V061 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Trim80Q3V061 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim80Q3V061 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim80Q3V061 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.73■□□□□ 0.75
Trim80Q3V061 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim80Q3V061 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim80Q3V061 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim80Q3V061 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim80Q3V061 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim80Q3V061 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim80Q3V061 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim80Q3V061 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim80Q3V061 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim80Q3V061 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim80Q3V061 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.7■□□□□ 0.74
Trim80Q3V061 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms