Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdkl5Q3UTQ8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdkl5Q3UTQ8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdkl5Q3UTQ8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdkl5Q3UTQ8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cdkl5Q3UTQ8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Cdkl5Q3UTQ8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.32■■□□□ 1.16
Cdkl5Q3UTQ8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cdkl5Q3UTQ8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Cdkl5Q3UTQ8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdkl5Q3UTQ8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Gm26833-201ENSMUST00000180899 440 ntBASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdkl5Q3UTQ8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Gm43017-201ENSMUST00000198296 752 ntBASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdkl5Q3UTQ8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdkl5Q3UTQ8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdkl5Q3UTQ8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cdkl5Q3UTQ8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Gm27801-201ENSMUST00000184174 223 ntBASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdkl5Q3UTQ8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl5Q3UTQ8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl5Q3UTQ8 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.25■■□□□ 1.15
Cdkl5Q3UTQ8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.25■■□□□ 1.15
Cdkl5Q3UTQ8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Cdkl5Q3UTQ8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.25■■□□□ 1.15
Cdkl5Q3UTQ8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
Cdkl5Q3UTQ8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Cdkl5Q3UTQ8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms