Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.4■□□□□ 0.22
Cln6Q3U466 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.4■□□□□ 0.22
Cln6Q3U466 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.4■□□□□ 0.22
Cln6Q3U466 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.4■□□□□ 0.22
Cln6Q3U466 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cln6Q3U466 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.4■□□□□ 0.22
Cln6Q3U466 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cln6Q3U466 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.39■□□□□ 0.21
Cln6Q3U466 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Etf1-202ENSMUST00000180351 108 ntBASIC16.39■□□□□ 0.21
Cln6Q3U466 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln6Q3U466 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln6Q3U466 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cln6Q3U466 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln6Q3U466 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln6Q3U466 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Cln6Q3U466 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.38■□□□□ 0.21
Cln6Q3U466 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln6Q3U466 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Cln6Q3U466 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cln6Q3U466 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cln6Q3U466 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.38■□□□□ 0.21
Cln6Q3U466 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln6Q3U466 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.37■□□□□ 0.21
Cln6Q3U466 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cln6Q3U466 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.37■□□□□ 0.21
Cln6Q3U466 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln6Q3U466 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cln6Q3U466 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cln6Q3U466 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cln6Q3U466 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cln6Q3U466 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.36■□□□□ 0.21
Cln6Q3U466 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cln6Q3U466 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cln6Q3U466 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cln6Q3U466 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cln6Q3U466 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
Cln6Q3U466 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cln6Q3U466 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.34■□□□□ 0.21
Cln6Q3U466 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cln6Q3U466 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.34■□□□□ 0.21
Cln6Q3U466 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cln6Q3U466 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cln6Q3U466 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cln6Q3U466 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cln6Q3U466 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cln6Q3U466 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cln6Q3U466 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cln6Q3U466 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cln6Q3U466 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cln6Q3U466 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cln6Q3U466 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cln6Q3U466 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms