Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh6P97326 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh6P97326 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh6P97326 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh6P97326 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh6P97326 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdh6P97326 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Cdh6P97326 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
Cdh6P97326 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdh6P97326 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh6P97326 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Cdh6P97326 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.55■□□□□ 0.72
Cdh6P97326 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh6P97326 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh6P97326 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cdh6P97326 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh6P97326 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.54■□□□□ 0.72
Cdh6P97326 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh6P97326 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh6P97326 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdh6P97326 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh6P97326 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh6P97326 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh6P97326 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh6P97326 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh6P97326 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.53■□□□□ 0.72
Cdh6P97326 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.53■□□□□ 0.72
Cdh6P97326 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.53■□□□□ 0.72
Cdh6P97326 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.53■□□□□ 0.72
Cdh6P97326 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh6P97326 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh6P97326 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh6P97326 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Cdh6P97326 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh6P97326 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.51■□□□□ 0.71
Cdh6P97326 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.51■□□□□ 0.71
Cdh6P97326 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.51■□□□□ 0.71
Cdh6P97326 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh6P97326 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.5■□□□□ 0.71
Cdh6P97326 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh6P97326 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh6P97326 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh6P97326 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh6P97326 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Cdh6P97326 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh6P97326 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Cdh6P97326 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh6P97326 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh6P97326 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.49■□□□□ 0.71
Cdh6P97326 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh6P97326 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdh6P97326 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cdh6P97326 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh6P97326 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh6P97326 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cdh6P97326 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cdh6P97326 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh6P97326 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cdh6P97326 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh6P97326 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh6P97326 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh6P97326 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh6P97326 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Cdh6P97326 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh6P97326 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Cdh6P97326 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.47■□□□□ 0.71
Cdh6P97326 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms