Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SgcaP82350 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SgcaP82350 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.12■□□□□ 0.17
SgcaP82350 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.12■□□□□ 0.17
SgcaP82350 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SgcaP82350 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcaP82350 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SgcaP82350 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SgcaP82350 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.11■□□□□ 0.17
SgcaP82350 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcaP82350 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SgcaP82350 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.1■□□□□ 0.17
SgcaP82350 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SgcaP82350 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcaP82350 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.09■□□□□ 0.17
SgcaP82350 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.09■□□□□ 0.17
SgcaP82350 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.09■□□□□ 0.17
SgcaP82350 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SgcaP82350 Rarb-207ENSMUST00000225921 2756 ntBASIC16.09■□□□□ 0.17
SgcaP82350 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.09■□□□□ 0.17
SgcaP82350 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SgcaP82350 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcaP82350 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcaP82350 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcaP82350 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SgcaP82350 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcaP82350 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.08■□□□□ 0.16
SgcaP82350 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.08■□□□□ 0.16
SgcaP82350 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcaP82350 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SgcaP82350 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SgcaP82350 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SgcaP82350 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcaP82350 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms