Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Six5P70178 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Six5P70178 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18■□□□□ 0.47
Six5P70178 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18■□□□□ 0.47
Six5P70178 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Six5P70178 Gm2011-201ENSMUST00000203124 1263 ntBASIC18■□□□□ 0.47
Six5P70178 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Six5P70178 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six5P70178 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.99■□□□□ 0.47
Six5P70178 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.99■□□□□ 0.47
Six5P70178 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.99■□□□□ 0.47
Six5P70178 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six5P70178 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six5P70178 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six5P70178 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Six5P70178 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six5P70178 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Six5P70178 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Six5P70178 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six5P70178 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six5P70178 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six5P70178 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.98■□□□□ 0.47
Six5P70178 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Six5P70178 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.97■□□□□ 0.47
Six5P70178 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Six5P70178 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.97■□□□□ 0.47
Six5P70178 Gm43060-201ENSMUST00000200621 289 ntBASIC17.97■□□□□ 0.47
Six5P70178 Gm40848-201ENSMUST00000221998 324 ntBASIC17.97■□□□□ 0.47
Six5P70178 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.97■□□□□ 0.47
Six5P70178 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.97■□□□□ 0.47
Six5P70178 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.97■□□□□ 0.47
Six5P70178 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six5P70178 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.96■□□□□ 0.47
Six5P70178 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.96■□□□□ 0.47
Six5P70178 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.96■□□□□ 0.47
Six5P70178 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.96■□□□□ 0.47
Six5P70178 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Six5P70178 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six5P70178 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Six5P70178 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.95■□□□□ 0.46
Six5P70178 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.95■□□□□ 0.46
Six5P70178 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Six5P70178 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.95■□□□□ 0.46
Six5P70178 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six5P70178 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Six5P70178 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms