Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Usp46P62069 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Usp46P62069 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp46P62069 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Gm37179-201ENSMUST00000194862 823 ntBASIC20.17■□□□□ 0.82
Usp46P62069 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp46P62069 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.17■□□□□ 0.82
Usp46P62069 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp46P62069 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp46P62069 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp46P62069 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp46P62069 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp46P62069 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Usp46P62069 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Usp46P62069 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp46P62069 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.15■□□□□ 0.82
Usp46P62069 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.15■□□□□ 0.82
Usp46P62069 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Usp46P62069 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp46P62069 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp46P62069 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp46P62069 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp46P62069 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp46P62069 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp46P62069 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp46P62069 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp46P62069 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp46P62069 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp46P62069 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp46P62069 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp46P62069 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp46P62069 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp46P62069 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp46P62069 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.13■□□□□ 0.81
Usp46P62069 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp46P62069 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.13■□□□□ 0.81
Usp46P62069 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp46P62069 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp46P62069 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp46P62069 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp46P62069 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp46P62069 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.13■□□□□ 0.81
Usp46P62069 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.12■□□□□ 0.81
Usp46P62069 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Usp46P62069 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Usp46P62069 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Usp46P62069 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.12■□□□□ 0.81
Usp46P62069 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Usp46P62069 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp46P62069 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.11■□□□□ 0.81
Usp46P62069 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.11■□□□□ 0.81
Usp46P62069 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp46P62069 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Usp46P62069 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.1■□□□□ 0.81
Usp46P62069 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp46P62069 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Usp46P62069 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp46P62069 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Usp46P62069 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp46P62069 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Usp46P62069 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp46P62069 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp46P62069 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp46P62069 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp46P62069 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms