Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cks1bP61025 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.68□□□□□ -0.22
Cks1bP61025 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.68□□□□□ -0.22
Cks1bP61025 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.68□□□□□ -0.22
Cks1bP61025 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.68□□□□□ -0.22
Cks1bP61025 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cks1bP61025 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cks1bP61025 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.67□□□□□ -0.22
Cks1bP61025 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cks1bP61025 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.67□□□□□ -0.22
Cks1bP61025 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1bP61025 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.66□□□□□ -0.22
Cks1bP61025 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cks1bP61025 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.66□□□□□ -0.22
Cks1bP61025 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.66□□□□□ -0.22
Cks1bP61025 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cks1bP61025 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.66□□□□□ -0.22
Cks1bP61025 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.66□□□□□ -0.22
Cks1bP61025 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cks1bP61025 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1bP61025 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cks1bP61025 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.65□□□□□ -0.22
Cks1bP61025 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.65□□□□□ -0.22
Cks1bP61025 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.65□□□□□ -0.22
Cks1bP61025 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cks1bP61025 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cks1bP61025 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1bP61025 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cks1bP61025 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cks1bP61025 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.64□□□□□ -0.23
Cks1bP61025 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms