Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tpm1P58771 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tpm1P58771 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Tpm1P58771 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Tpm1P58771 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.46■■□□□ 1.03
Tpm1P58771 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Tpm1P58771 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tpm1P58771 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.03
Tpm1P58771 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Tpm1P58771 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Gm43530-201ENSMUST00000195920 274 ntBASIC21.45■■□□□ 1.02
Tpm1P58771 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tpm1P58771 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Tpm1P58771 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tpm1P58771 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Tpm1P58771 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tpm1P58771 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.44■■□□□ 1.02
Tpm1P58771 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tpm1P58771 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Tpm1P58771 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tpm1P58771 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
Tpm1P58771 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
Tpm1P58771 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.43■■□□□ 1.02
Tpm1P58771 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Tpm1P58771 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tpm1P58771 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.42■■□□□ 1.02
Tpm1P58771 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Tpm1P58771 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tpm1P58771 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Tpm1P58771 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Tpm1P58771 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tpm1P58771 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Tpm1P58771 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.4■■□□□ 1.02
Tpm1P58771 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.4■■□□□ 1.02
Tpm1P58771 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tpm1P58771 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.39■■□□□ 1.02
Tpm1P58771 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tpm1P58771 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tpm1P58771 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tpm1P58771 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tpm1P58771 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tpm1P58771 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tpm1P58771 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Tpm1P58771 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tpm1P58771 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tpm1P58771 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Tpm1P58771 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Tpm1P58771 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tpm1P58771 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tpm1P58771 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tpm1P58771 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms