Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SmoP56726 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SmoP56726 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.46■□□□□ 0.71
SmoP56726 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SmoP56726 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SmoP56726 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SmoP56726 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SmoP56726 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SmoP56726 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
SmoP56726 Gm38205-201ENSMUST00000192243 258 ntBASIC19.45■□□□□ 0.7
SmoP56726 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SmoP56726 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SmoP56726 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SmoP56726 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.44■□□□□ 0.7
SmoP56726 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SmoP56726 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.44■□□□□ 0.7
SmoP56726 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SmoP56726 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SmoP56726 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SmoP56726 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.43■□□□□ 0.7
SmoP56726 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.43■□□□□ 0.7
SmoP56726 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.43■□□□□ 0.7
SmoP56726 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.43■□□□□ 0.7
SmoP56726 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.43■□□□□ 0.7
SmoP56726 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SmoP56726 Gm13146-201ENSMUST00000118508 780 ntBASIC19.42■□□□□ 0.7
SmoP56726 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SmoP56726 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SmoP56726 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.42■□□□□ 0.7
SmoP56726 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.42■□□□□ 0.7
SmoP56726 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.42■□□□□ 0.7
SmoP56726 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SmoP56726 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SmoP56726 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.41■□□□□ 0.7
SmoP56726 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SmoP56726 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SmoP56726 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SmoP56726 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SmoP56726 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SmoP56726 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SmoP56726 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SmoP56726 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SmoP56726 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SmoP56726 Gm7860-201ENSMUST00000121190 879 ntBASIC19.4■□□□□ 0.7
SmoP56726 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.4■□□□□ 0.7
SmoP56726 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.4■□□□□ 0.7
SmoP56726 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.4■□□□□ 0.7
SmoP56726 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.4■□□□□ 0.7
SmoP56726 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SmoP56726 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SmoP56726 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SmoP56726 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SmoP56726 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.39■□□□□ 0.69
SmoP56726 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SmoP56726 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
SmoP56726 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SmoP56726 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms