Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2bP55271 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.49■□□□□ 0.55
Cdkn2bP55271 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.49■□□□□ 0.55
Cdkn2bP55271 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.49■□□□□ 0.55
Cdkn2bP55271 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdkn2bP55271 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2bP55271 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Cdkn2bP55271 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cdkn2bP55271 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2bP55271 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.47■□□□□ 0.55
Cdkn2bP55271 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2bP55271 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.46■□□□□ 0.55
Cdkn2bP55271 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Serp2-204ENSMUST00000228055 705 ntBASIC18.46■□□□□ 0.55
Cdkn2bP55271 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2bP55271 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Cdkn2bP55271 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.45■□□□□ 0.54
Cdkn2bP55271 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2bP55271 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.44■□□□□ 0.54
Cdkn2bP55271 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cdkn2bP55271 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkn2bP55271 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.43■□□□□ 0.54
Cdkn2bP55271 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms