Protein–RNA interactions for Protein: P54279

Pms2, Mismatch repair endonuclease PMS2, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pms2P54279 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pms2P54279 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.72■□□□□ 0.75
Pms2P54279 Serp2-204ENSMUST00000228055 705 ntBASIC19.72■□□□□ 0.75
Pms2P54279 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pms2P54279 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.71■□□□□ 0.75
Pms2P54279 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Pms2P54279 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.71■□□□□ 0.75
Pms2P54279 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.71■□□□□ 0.75
Pms2P54279 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pms2P54279 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.71■□□□□ 0.75
Pms2P54279 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.7■□□□□ 0.74
Pms2P54279 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.7■□□□□ 0.74
Pms2P54279 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pms2P54279 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pms2P54279 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pms2P54279 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pms2P54279 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pms2P54279 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.69■□□□□ 0.74
Pms2P54279 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pms2P54279 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pms2P54279 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Pms2P54279 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.68■□□□□ 0.74
Pms2P54279 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.68■□□□□ 0.74
Pms2P54279 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pms2P54279 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.67■□□□□ 0.74
Pms2P54279 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pms2P54279 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.67■□□□□ 0.74
Pms2P54279 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pms2P54279 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pms2P54279 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pms2P54279 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pms2P54279 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.66■□□□□ 0.74
Pms2P54279 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pms2P54279 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.66■□□□□ 0.74
Pms2P54279 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pms2P54279 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pms2P54279 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pms2P54279 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Pms2P54279 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Pms2P54279 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.65■□□□□ 0.74
Pms2P54279 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.65■□□□□ 0.74
Pms2P54279 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.65■□□□□ 0.74
Pms2P54279 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.65■□□□□ 0.74
Pms2P54279 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pms2P54279 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Pms2P54279 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pms2P54279 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pms2P54279 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pms2P54279 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pms2P54279 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pms2P54279 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms