Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr1P51675 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccr1P51675 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr1P51675 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccr1P51675 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr1P51675 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1P51675 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccr1P51675 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccr1P51675 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1P51675 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.05■□□□□ 0.96
Ccr1P51675 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.05■□□□□ 0.96
Ccr1P51675 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1P51675 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccr1P51675 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccr1P51675 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1P51675 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr1P51675 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr1P51675 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccr1P51675 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccr1P51675 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr1P51675 Gm13534-201ENSMUST00000121169 513 ntBASIC21.04■□□□□ 0.96
Ccr1P51675 Gm7860-201ENSMUST00000121190 879 ntBASIC21.04■□□□□ 0.96
Ccr1P51675 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.04■□□□□ 0.96
Ccr1P51675 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1P51675 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1P51675 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Ccr1P51675 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1P51675 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1P51675 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1P51675 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr1P51675 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1P51675 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1P51675 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1P51675 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1P51675 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccr1P51675 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1P51675 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccr1P51675 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccr1P51675 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ccr1P51675 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ccr1P51675 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccr1P51675 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
Ccr1P51675 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1P51675 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccr1P51675 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21■□□□□ 0.95
Ccr1P51675 Gm6420-201ENSMUST00000193885 723 ntBASIC21■□□□□ 0.95
Ccr1P51675 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccr1P51675 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccr1P51675 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccr1P51675 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccr1P51675 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1P51675 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccr1P51675 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.98■□□□□ 0.95
Ccr1P51675 Mir5133-201ENSMUST00000174955 77 ntBASIC20.98■□□□□ 0.95
Ccr1P51675 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.98■□□□□ 0.95
Ccr1P51675 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccr1P51675 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccr1P51675 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1P51675 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1P51675 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1P51675 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1P51675 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccr1P51675 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccr1P51675 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccr1P51675 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1P51675 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1P51675 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Ccr1P51675 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Nespas-201ENSMUST00000143738 1083 ntBASIC20.96■□□□□ 0.95
Ccr1P51675 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccr1P51675 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.96■□□□□ 0.95
Ccr1P51675 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccr1P51675 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Ccr1P51675 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms