Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SftpbP50405 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SftpbP50405 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SftpbP50405 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SftpbP50405 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SftpbP50405 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SftpbP50405 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SftpbP50405 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SftpbP50405 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SftpbP50405 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.67■□□□□ 0.74
SftpbP50405 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SftpbP50405 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.67■□□□□ 0.74
SftpbP50405 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SftpbP50405 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SftpbP50405 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SftpbP50405 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
SftpbP50405 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SftpbP50405 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SftpbP50405 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SftpbP50405 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.66■□□□□ 0.74
SftpbP50405 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SftpbP50405 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SftpbP50405 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SftpbP50405 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SftpbP50405 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.65■□□□□ 0.74
SftpbP50405 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SftpbP50405 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SftpbP50405 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.65■□□□□ 0.74
SftpbP50405 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SftpbP50405 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SftpbP50405 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
SftpbP50405 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.64■□□□□ 0.74
SftpbP50405 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.64■□□□□ 0.73
SftpbP50405 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.64■□□□□ 0.73
SftpbP50405 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
SftpbP50405 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SftpbP50405 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SftpbP50405 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SftpbP50405 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.63■□□□□ 0.73
SftpbP50405 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.63■□□□□ 0.73
SftpbP50405 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SftpbP50405 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.63■□□□□ 0.73
SftpbP50405 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.63■□□□□ 0.73
SftpbP50405 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SftpbP50405 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.62■□□□□ 0.73
SftpbP50405 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SftpbP50405 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SftpbP50405 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SftpbP50405 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SftpbP50405 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SftpbP50405 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SftpbP50405 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SftpbP50405 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SftpbP50405 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SftpbP50405 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SftpbP50405 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SftpbP50405 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.61■□□□□ 0.73
SftpbP50405 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SftpbP50405 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SftpbP50405 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.61■□□□□ 0.73
SftpbP50405 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SftpbP50405 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SftpbP50405 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SftpbP50405 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SftpbP50405 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
SftpbP50405 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SftpbP50405 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SftpbP50405 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms