Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.67□□□□□ -0.38
Xcl1P47993 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Xcl1P47993 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Xcl1P47993 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Xcl1P47993 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Xcl1P47993 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Xcl1P47993 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Xcl1P47993 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Xcl1P47993 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Xcl1P47993 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Xcl1P47993 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Xcl1P47993 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.64□□□□□ -0.39
Xcl1P47993 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Xcl1P47993 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC12.64□□□□□ -0.39
Xcl1P47993 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Xcl1P47993 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.64□□□□□ -0.39
Xcl1P47993 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Xcl1P47993 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Xcl1P47993 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Xcl1P47993 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.63□□□□□ -0.39
Xcl1P47993 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Xcl1P47993 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.63□□□□□ -0.39
Xcl1P47993 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Xcl1P47993 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Xcl1P47993 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Xcl1P47993 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Xcl1P47993 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.62□□□□□ -0.39
Xcl1P47993 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Xcl1P47993 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.62□□□□□ -0.39
Xcl1P47993 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Xcl1P47993 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms