Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Gm21956-201ENSMUST00000179946 522 ntBASIC19.49■□□□□ 0.71
Vps4bP46467 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.49■□□□□ 0.71
Vps4bP46467 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps4bP46467 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Vps4bP46467 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps4bP46467 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps4bP46467 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vps4bP46467 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4bP46467 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps4bP46467 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Gm12821-201ENSMUST00000120022 600 ntBASIC19.47■□□□□ 0.71
Vps4bP46467 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Vps4bP46467 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.47■□□□□ 0.71
Vps4bP46467 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4bP46467 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Vps4bP46467 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps4bP46467 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Vps4bP46467 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps4bP46467 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps4bP46467 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4bP46467 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vps4bP46467 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Vps4bP46467 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Vps4bP46467 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.45■□□□□ 0.7
Vps4bP46467 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.45■□□□□ 0.7
Vps4bP46467 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.45■□□□□ 0.7
Vps4bP46467 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vps4bP46467 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4bP46467 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps4bP46467 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.44■□□□□ 0.7
Vps4bP46467 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.44■□□□□ 0.7
Vps4bP46467 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.44■□□□□ 0.7
Vps4bP46467 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vps4bP46467 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Vps4bP46467 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Vps4bP46467 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4bP46467 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4bP46467 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4bP46467 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4bP46467 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vps4bP46467 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4bP46467 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.43■□□□□ 0.7
Vps4bP46467 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Vps4bP46467 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4bP46467 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps4bP46467 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vps4bP46467 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vps4bP46467 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps4bP46467 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.42■□□□□ 0.7
Vps4bP46467 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4bP46467 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.41■□□□□ 0.7
Vps4bP46467 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms