Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.5■□□□□ 0.55
Sox18P43680 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.5■□□□□ 0.55
Sox18P43680 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sox18P43680 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sox18P43680 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox18P43680 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox18P43680 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox18P43680 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sox18P43680 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sox18P43680 Gm26524-201ENSMUST00000192339 390 ntBASIC18.49■□□□□ 0.55
Sox18P43680 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.49■□□□□ 0.55
Sox18P43680 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox18P43680 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox18P43680 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Sox18P43680 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sox18P43680 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.48■□□□□ 0.55
Sox18P43680 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox18P43680 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.47■□□□□ 0.55
Sox18P43680 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sox18P43680 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.47■□□□□ 0.55
Sox18P43680 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.46■□□□□ 0.55
Sox18P43680 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sox18P43680 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.46■□□□□ 0.55
Sox18P43680 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.46■□□□□ 0.55
Sox18P43680 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.46■□□□□ 0.55
Sox18P43680 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Sox18P43680 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox18P43680 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Sox18P43680 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox18P43680 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox18P43680 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Sox18P43680 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox18P43680 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.45■□□□□ 0.54
Sox18P43680 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sox18P43680 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox18P43680 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.45■□□□□ 0.54
Sox18P43680 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox18P43680 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox18P43680 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sox18P43680 Gm13534-201ENSMUST00000121169 513 ntBASIC18.44■□□□□ 0.54
Sox18P43680 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 Gm38205-201ENSMUST00000192243 258 ntBASIC18.44■□□□□ 0.54
Sox18P43680 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.44■□□□□ 0.54
Sox18P43680 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox18P43680 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.44■□□□□ 0.54
Sox18P43680 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sox18P43680 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox18P43680 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sox18P43680 Gm27275-201ENSMUST00000184318 272 ntBASIC18.43■□□□□ 0.54
Sox18P43680 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox18P43680 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.43■□□□□ 0.54
Sox18P43680 Rab3c-203ENSMUST00000224180 967 ntBASIC18.43■□□□□ 0.54
Sox18P43680 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox18P43680 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox18P43680 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox18P43680 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Gm715-201ENSMUST00000117865 831 ntBASIC18.42■□□□□ 0.54
Sox18P43680 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox18P43680 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms