Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.31■□□□□ 0.2
Hist1h1dP43277 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.3■□□□□ 0.2
Hist1h1dP43277 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Hist1h1dP43277 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.3■□□□□ 0.2
Hist1h1dP43277 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1dP43277 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.29■□□□□ 0.2
Hist1h1dP43277 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hist1h1dP43277 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.29■□□□□ 0.2
Hist1h1dP43277 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1dP43277 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.28■□□□□ 0.2
Hist1h1dP43277 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h1dP43277 BC021767-201ENSMUST00000126387 1716 ntBASIC16.28■□□□□ 0.2
Hist1h1dP43277 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hist1h1dP43277 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.27■□□□□ 0.2
Hist1h1dP43277 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1dP43277 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.27■□□□□ 0.2
Hist1h1dP43277 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h1dP43277 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hist1h1dP43277 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1dP43277 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h1dP43277 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.26■□□□□ 0.19
Hist1h1dP43277 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h1dP43277 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.25■□□□□ 0.19
Hist1h1dP43277 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h1dP43277 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1dP43277 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1dP43277 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1dP43277 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1dP43277 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h1dP43277 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms