Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.92■□□□□ 0.14
Abca1P41233 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.92■□□□□ 0.14
Abca1P41233 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.92■□□□□ 0.14
Abca1P41233 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Abca1P41233 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Abca1P41233 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Abca1P41233 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.91■□□□□ 0.14
Abca1P41233 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.91■□□□□ 0.14
Abca1P41233 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Gm7290-201ENSMUST00000104990 617 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Gm12918-201ENSMUST00000120234 636 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Gm15710-201ENSMUST00000121821 636 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Gm20760-201ENSMUST00000179197 648 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Gm5075-201ENSMUST00000196916 622 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Abca1P41233 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.91■□□□□ 0.14
Abca1P41233 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca1P41233 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Abca1P41233 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
Abca1P41233 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Gm6365-201ENSMUST00000054711 744 ntBASIC15.9■□□□□ 0.14
Abca1P41233 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Abca1P41233 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Abca1P41233 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abca1P41233 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Abca1P41233 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.89■□□□□ 0.13
Abca1P41233 Gm10252-201ENSMUST00000209541 832 ntBASIC15.89■□□□□ 0.13
Abca1P41233 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Abca1P41233 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Mir7071-201ENSMUST00000184847 69 ntBASIC15.89■□□□□ 0.13
Abca1P41233 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Abca1P41233 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca1P41233 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Abca1P41233 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Abca1P41233 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.88■□□□□ 0.13
Abca1P41233 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Abca1P41233 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.88■□□□□ 0.13
Abca1P41233 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.88■□□□□ 0.13
Abca1P41233 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca1P41233 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Abca1P41233 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.87■□□□□ 0.13
Abca1P41233 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.87■□□□□ 0.13
Abca1P41233 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Abca1P41233 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca1P41233 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Abca1P41233 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca1P41233 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca1P41233 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca1P41233 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Abca1P41233 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca1P41233 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca1P41233 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca1P41233 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.86■□□□□ 0.13
Abca1P41233 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms