Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl12P40224 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl12P40224 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Cxcl12P40224 Dio3-201ENSMUST00000097228 1449 ntBASIC20.03■□□□□ 0.8
Cxcl12P40224 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.03■□□□□ 0.8
Cxcl12P40224 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl12P40224 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl12P40224 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl12P40224 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl12P40224 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cxcl12P40224 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl12P40224 Gm7860-201ENSMUST00000121190 879 ntBASIC20.02■□□□□ 0.8
Cxcl12P40224 Gm18666-201ENSMUST00000190039 958 ntBASIC20.02■□□□□ 0.8
Cxcl12P40224 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl12P40224 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl12P40224 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcl12P40224 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cxcl12P40224 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.01■□□□□ 0.79
Cxcl12P40224 Gm37055-201ENSMUST00000191866 133 ntBASIC20.01■□□□□ 0.79
Cxcl12P40224 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.01■□□□□ 0.79
Cxcl12P40224 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cxcl12P40224 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl12P40224 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl12P40224 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl12P40224 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cxcl12P40224 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cxcl12P40224 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20■□□□□ 0.79
Cxcl12P40224 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Cxcl12P40224 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20■□□□□ 0.79
Cxcl12P40224 AC153881.1-201ENSMUST00000214448 284 ntBASIC20■□□□□ 0.79
Cxcl12P40224 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cxcl12P40224 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cxcl12P40224 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.99■□□□□ 0.79
Cxcl12P40224 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.99■□□□□ 0.79
Cxcl12P40224 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cxcl12P40224 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl12P40224 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cxcl12P40224 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cxcl12P40224 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl12P40224 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cxcl12P40224 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.98■□□□□ 0.79
Cxcl12P40224 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl12P40224 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.98■□□□□ 0.79
Cxcl12P40224 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl12P40224 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl12P40224 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.97■□□□□ 0.79
Cxcl12P40224 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl12P40224 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl12P40224 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl12P40224 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl12P40224 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.96■□□□□ 0.79
Cxcl12P40224 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cxcl12P40224 Gm15378-201ENSMUST00000121894 207 ntBASIC19.96■□□□□ 0.79
Cxcl12P40224 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.96■□□□□ 0.79
Cxcl12P40224 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.96■□□□□ 0.79
Cxcl12P40224 Gm9987-201ENSMUST00000069768 567 ntBASIC19.96■□□□□ 0.79
Cxcl12P40224 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl12P40224 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Cxcl12P40224 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cxcl12P40224 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.95■□□□□ 0.78
Cxcl12P40224 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Cxcl12P40224 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Cxcl12P40224 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl12P40224 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cxcl12P40224 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cxcl12P40224 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms