Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Sox5P35710 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sox5P35710 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Sox5P35710 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.06■□□□□ 0.96
Sox5P35710 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Sox5P35710 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox5P35710 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.05■□□□□ 0.96
Sox5P35710 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.05■□□□□ 0.96
Sox5P35710 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sox5P35710 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sox5P35710 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox5P35710 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox5P35710 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox5P35710 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.04■□□□□ 0.96
Sox5P35710 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
Sox5P35710 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.04■□□□□ 0.96
Sox5P35710 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Sox5P35710 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox5P35710 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sox5P35710 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox5P35710 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.03■□□□□ 0.96
Sox5P35710 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox5P35710 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox5P35710 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox5P35710 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox5P35710 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.03■□□□□ 0.96
Sox5P35710 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox5P35710 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox5P35710 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sox5P35710 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.03■□□□□ 0.96
Sox5P35710 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sox5P35710 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.02■□□□□ 0.96
Sox5P35710 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.02■□□□□ 0.96
Sox5P35710 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.02■□□□□ 0.96
Sox5P35710 Serp2-204ENSMUST00000228055 705 ntBASIC21.02■□□□□ 0.96
Sox5P35710 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sox5P35710 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox5P35710 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sox5P35710 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sox5P35710 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sox5P35710 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox5P35710 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox5P35710 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox5P35710 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.01■□□□□ 0.95
Sox5P35710 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox5P35710 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox5P35710 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox5P35710 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sox5P35710 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.01■□□□□ 0.95
Sox5P35710 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox5P35710 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sox5P35710 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sox5P35710 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sox5P35710 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21■□□□□ 0.95
Sox5P35710 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox5P35710 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sox5P35710 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.99■□□□□ 0.95
Sox5P35710 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.99■□□□□ 0.95
Sox5P35710 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Sox5P35710 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox5P35710 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sox5P35710 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms