Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Golph3-202ENSMUST00000226517 2359 ntBASIC17.86■□□□□ 0.45
Foxa1P35582 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Foxa1P35582 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.85■□□□□ 0.45
Foxa1P35582 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxa1P35582 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Foxa1P35582 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Foxa1P35582 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.84■□□□□ 0.45
Foxa1P35582 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Foxa1P35582 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Foxa1P35582 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Foxa1P35582 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Foxa1P35582 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Foxa1P35582 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Foxa1P35582 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Foxa1P35582 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Foxa1P35582 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Gm27801-201ENSMUST00000184174 223 ntBASIC17.83■□□□□ 0.44
Foxa1P35582 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.83■□□□□ 0.44
Foxa1P35582 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Foxa1P35582 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.83■□□□□ 0.44
Foxa1P35582 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxa1P35582 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.82■□□□□ 0.44
Foxa1P35582 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Foxa1P35582 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.82■□□□□ 0.44
Foxa1P35582 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa1P35582 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.81■□□□□ 0.44
Foxa1P35582 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.81■□□□□ 0.44
Foxa1P35582 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.81■□□□□ 0.44
Foxa1P35582 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa1P35582 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa1P35582 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Foxa1P35582 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Foxa1P35582 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa1P35582 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa1P35582 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa1P35582 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa1P35582 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Foxa1P35582 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa1P35582 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa1P35582 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa1P35582 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Foxa1P35582 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa1P35582 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa1P35582 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.78■□□□□ 0.44
Foxa1P35582 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Foxa1P35582 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Foxa1P35582 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa1P35582 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.78■□□□□ 0.44
Foxa1P35582 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Foxa1P35582 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Foxa1P35582 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.77■□□□□ 0.44
Foxa1P35582 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.77■□□□□ 0.44
Foxa1P35582 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.77■□□□□ 0.44
Foxa1P35582 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa1P35582 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Foxa1P35582 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.77■□□□□ 0.43
Foxa1P35582 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms