Protein–RNA interactions for Protein: P31245

Hoxa2, Homeobox protein Hox-A2, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa2P31245 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa2P31245 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa2P31245 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.83■□□□□ 0.6
Hoxa2P31245 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hoxa2P31245 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hoxa2P31245 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa2P31245 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa2P31245 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa2P31245 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa2P31245 Reep4-203ENSMUST00000226563 1444 ntBASIC18.83■□□□□ 0.6
Hoxa2P31245 AA386476-201ENSMUST00000098781 1665 ntBASIC18.82■□□□□ 0.6
Hoxa2P31245 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Hoxa2P31245 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.82■□□□□ 0.6
Hoxa2P31245 Gm37179-201ENSMUST00000194862 823 ntBASIC18.82■□□□□ 0.6
Hoxa2P31245 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.82■□□□□ 0.6
Hoxa2P31245 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.82■□□□□ 0.6
Hoxa2P31245 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.82■□□□□ 0.6
Hoxa2P31245 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hoxa2P31245 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa2P31245 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.81■□□□□ 0.6
Hoxa2P31245 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Hoxa2P31245 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.81■□□□□ 0.6
Hoxa2P31245 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.81■□□□□ 0.6
Hoxa2P31245 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Hoxa2P31245 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa2P31245 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.8■□□□□ 0.6
Hoxa2P31245 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.8■□□□□ 0.6
Hoxa2P31245 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa2P31245 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa2P31245 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa2P31245 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa2P31245 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hoxa2P31245 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.79■□□□□ 0.6
Hoxa2P31245 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.79■□□□□ 0.6
Hoxa2P31245 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa2P31245 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hoxa2P31245 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Hoxa2P31245 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa2P31245 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa2P31245 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.78■□□□□ 0.6
Hoxa2P31245 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa2P31245 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.78■□□□□ 0.6
Hoxa2P31245 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa2P31245 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa2P31245 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hoxa2P31245 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxa2P31245 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxa2P31245 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa2P31245 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa2P31245 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxa2P31245 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.77■□□□□ 0.6
Hoxa2P31245 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hoxa2P31245 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Hoxa2P31245 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa2P31245 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxa2P31245 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxa2P31245 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxa2P31245 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa2P31245 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa2P31245 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Hoxa2P31245 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa2P31245 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa2P31245 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa2P31245 Gm29257-201ENSMUST00000186115 639 ntBASIC18.76■□□□□ 0.59
Hoxa2P31245 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hoxa2P31245 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa2P31245 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxa2P31245 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.75■□□□□ 0.59
Hoxa2P31245 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms