Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cbx3P23198 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cbx3P23198 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cbx3P23198 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cbx3P23198 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.47■□□□□ 0.39
Cbx3P23198 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cbx3P23198 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.47■□□□□ 0.39
Cbx3P23198 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cbx3P23198 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cbx3P23198 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.46■□□□□ 0.39
Cbx3P23198 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cbx3P23198 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
Cbx3P23198 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cbx3P23198 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.45■□□□□ 0.38
Cbx3P23198 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.45■□□□□ 0.38
Cbx3P23198 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.45■□□□□ 0.38
Cbx3P23198 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.45■□□□□ 0.38
Cbx3P23198 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cbx3P23198 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Cbx3P23198 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cbx3P23198 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.44■□□□□ 0.38
Cbx3P23198 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.44■□□□□ 0.38
Cbx3P23198 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.44■□□□□ 0.38
Cbx3P23198 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cbx3P23198 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cbx3P23198 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cbx3P23198 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.43■□□□□ 0.38
Cbx3P23198 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cbx3P23198 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cbx3P23198 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.42■□□□□ 0.38
Cbx3P23198 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cbx3P23198 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.41■□□□□ 0.38
Cbx3P23198 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.41■□□□□ 0.38
Cbx3P23198 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms