Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BdnfP21237 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BdnfP21237 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BdnfP21237 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BdnfP21237 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BdnfP21237 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BdnfP21237 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BdnfP21237 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BdnfP21237 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BdnfP21237 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
BdnfP21237 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BdnfP21237 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BdnfP21237 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.39■□□□□ 0.54
BdnfP21237 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 AA386476-201ENSMUST00000098781 1665 ntBASIC18.39■□□□□ 0.53
BdnfP21237 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
BdnfP21237 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.39■□□□□ 0.53
BdnfP21237 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.39■□□□□ 0.53
BdnfP21237 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BdnfP21237 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
BdnfP21237 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.38■□□□□ 0.53
BdnfP21237 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
BdnfP21237 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.38■□□□□ 0.53
BdnfP21237 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
BdnfP21237 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BdnfP21237 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BdnfP21237 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
BdnfP21237 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.37■□□□□ 0.53
BdnfP21237 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BdnfP21237 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.37■□□□□ 0.53
BdnfP21237 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BdnfP21237 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
BdnfP21237 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.36■□□□□ 0.53
BdnfP21237 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BdnfP21237 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.36■□□□□ 0.53
BdnfP21237 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BdnfP21237 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BdnfP21237 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BdnfP21237 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.35■□□□□ 0.53
BdnfP21237 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BdnfP21237 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BdnfP21237 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BdnfP21237 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.34■□□□□ 0.53
BdnfP21237 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BdnfP21237 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.34■□□□□ 0.53
BdnfP21237 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms