Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.64■□□□□ 0.41
Hmgn1P18608 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Hmgn1P18608 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.64■□□□□ 0.41
Hmgn1P18608 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn1P18608 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn1P18608 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.63■□□□□ 0.41
Hmgn1P18608 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn1P18608 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.63■□□□□ 0.41
Hmgn1P18608 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn1P18608 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.62■□□□□ 0.41
Hmgn1P18608 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hmgn1P18608 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn1P18608 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn1P18608 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn1P18608 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.61■□□□□ 0.41
Hmgn1P18608 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn1P18608 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn1P18608 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn1P18608 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn1P18608 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn1P18608 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.6■□□□□ 0.41
Hmgn1P18608 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hmgn1P18608 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hmgn1P18608 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgn1P18608 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hmgn1P18608 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Hmgn1P18608 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn1P18608 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn1P18608 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Hmgn1P18608 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn1P18608 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn1P18608 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.59■□□□□ 0.41
Hmgn1P18608 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.59■□□□□ 0.41
Hmgn1P18608 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn1P18608 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn1P18608 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgn1P18608 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgn1P18608 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgn1P18608 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn1P18608 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn1P18608 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
Hmgn1P18608 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.58■□□□□ 0.4
Hmgn1P18608 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.58■□□□□ 0.4
Hmgn1P18608 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hmgn1P18608 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hmgn1P18608 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn1P18608 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.58■□□□□ 0.4
Hmgn1P18608 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms