Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Ctla2aP12399 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ctla2aP12399 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.37■□□□□ 0.37
Ctla2aP12399 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.37■□□□□ 0.37
Ctla2aP12399 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.37■□□□□ 0.37
Ctla2aP12399 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.37■□□□□ 0.37
Ctla2aP12399 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.37■□□□□ 0.37
Ctla2aP12399 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctla2aP12399 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ctla2aP12399 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctla2aP12399 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctla2aP12399 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctla2aP12399 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctla2aP12399 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctla2aP12399 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ctla2aP12399 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Gm7332-201ENSMUST00000118351 454 ntBASIC17.35■□□□□ 0.37
Ctla2aP12399 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.35■□□□□ 0.37
Ctla2aP12399 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ctla2aP12399 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctla2aP12399 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.35■□□□□ 0.37
Ctla2aP12399 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ctla2aP12399 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ctla2aP12399 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ctla2aP12399 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ctla2aP12399 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ctla2aP12399 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.34■□□□□ 0.37
Ctla2aP12399 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.34■□□□□ 0.37
Ctla2aP12399 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctla2aP12399 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ctla2aP12399 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ctla2aP12399 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctla2aP12399 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ctla2aP12399 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctla2aP12399 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ctla2aP12399 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.33■□□□□ 0.36
Ctla2aP12399 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ctla2aP12399 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctla2aP12399 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ctla2aP12399 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.32■□□□□ 0.36
Ctla2aP12399 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ctla2aP12399 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ctla2aP12399 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctla2aP12399 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ctla2aP12399 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ctla2aP12399 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.31■□□□□ 0.36
Ctla2aP12399 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.31■□□□□ 0.36
Ctla2aP12399 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctla2aP12399 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctla2aP12399 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctla2aP12399 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms