Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hoxa9P09631 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.43■□□□□ 0.7
Hoxa9P09631 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa9P09631 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.42■□□□□ 0.7
Hoxa9P09631 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hoxa9P09631 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.42■□□□□ 0.7
Hoxa9P09631 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hoxa9P09631 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa9P09631 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Hoxa9P09631 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Golph3-202ENSMUST00000226517 2359 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Gm7290-201ENSMUST00000104990 617 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Gm12918-201ENSMUST00000120234 636 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Gm15710-201ENSMUST00000121821 636 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.41■□□□□ 0.7
Hoxa9P09631 Gm5075-201ENSMUST00000196916 622 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.41■□□□□ 0.7
Hoxa9P09631 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.41■□□□□ 0.7
Hoxa9P09631 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hoxa9P09631 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa9P09631 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.4■□□□□ 0.7
Hoxa9P09631 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hoxa9P09631 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa9P09631 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa9P09631 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxa9P09631 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa9P09631 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxa9P09631 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa9P09631 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxa9P09631 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hoxa9P09631 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hoxa9P09631 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hoxa9P09631 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hoxa9P09631 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa9P09631 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Hoxa9P09631 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.37■□□□□ 0.69
Hoxa9P09631 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.37■□□□□ 0.69
Hoxa9P09631 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa9P09631 AA386476-201ENSMUST00000098781 1665 ntBASIC19.36■□□□□ 0.69
Hoxa9P09631 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Hoxa9P09631 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.36■□□□□ 0.69
Hoxa9P09631 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.36■□□□□ 0.69
Hoxa9P09631 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.36■□□□□ 0.69
Hoxa9P09631 Gm4968-201ENSMUST00000071458 858 ntBASIC19.36■□□□□ 0.69
Hoxa9P09631 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa9P09631 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms