Protein–RNA interactions for Protein: P09079

Hoxb5, Homeobox protein Hox-B5, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb5P09079 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.21■□□□□ 0.19
Hoxb5P09079 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb5P09079 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb5P09079 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb5P09079 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb5P09079 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxb5P09079 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxb5P09079 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxb5P09079 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb5P09079 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb5P09079 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb5P09079 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb5P09079 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb5P09079 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxb5P09079 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Rarb-207ENSMUST00000225921 2756 ntBASIC16.19■□□□□ 0.18
Hoxb5P09079 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Hoxb5P09079 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxb5P09079 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb5P09079 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.18■□□□□ 0.18
Hoxb5P09079 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hoxb5P09079 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hoxb5P09079 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxb5P09079 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hoxb5P09079 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxb5P09079 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxb5P09079 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.16■□□□□ 0.18
Hoxb5P09079 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxb5P09079 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.15■□□□□ 0.18
Hoxb5P09079 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxb5P09079 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxb5P09079 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms