Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm42642-201ENSMUST00000200683 355 ntBASIC19.05■□□□□ 0.64
Hoxa4P06798 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa4P06798 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa4P06798 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa4P06798 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Hoxa4P06798 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa4P06798 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa4P06798 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hoxa4P06798 Gm13146-201ENSMUST00000118508 780 ntBASIC19.04■□□□□ 0.64
Hoxa4P06798 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxa4P06798 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxa4P06798 Gm10033-202ENSMUST00000211874 928 ntBASIC19.04■□□□□ 0.64
Hoxa4P06798 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa4P06798 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hoxa4P06798 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa4P06798 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa4P06798 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa4P06798 Reep4-203ENSMUST00000226563 1444 ntBASIC19.03■□□□□ 0.64
Hoxa4P06798 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa4P06798 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa4P06798 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.03■□□□□ 0.64
Hoxa4P06798 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa4P06798 Gm42778-201ENSMUST00000199644 553 ntBASIC19.03■□□□□ 0.64
Hoxa4P06798 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa4P06798 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa4P06798 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa4P06798 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.02■□□□□ 0.64
Hoxa4P06798 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.02■□□□□ 0.64
Hoxa4P06798 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa4P06798 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa4P06798 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hoxa4P06798 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Hoxa4P06798 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa4P06798 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa4P06798 Gm10849-201ENSMUST00000100397 618 ntBASIC19.01■□□□□ 0.63
Hoxa4P06798 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa4P06798 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa4P06798 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa4P06798 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hoxa4P06798 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa4P06798 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hoxa4P06798 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Gm10616-201ENSMUST00000205285 2127 ntBASIC19■□□□□ 0.63
Hoxa4P06798 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hoxa4P06798 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Hoxa4P06798 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hoxa4P06798 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hoxa4P06798 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19■□□□□ 0.63
Hoxa4P06798 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa4P06798 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19■□□□□ 0.63
Hoxa4P06798 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa4P06798 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa4P06798 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa4P06798 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Hoxa4P06798 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Hoxa4P06798 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.99■□□□□ 0.63
Hoxa4P06798 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.99■□□□□ 0.63
Hoxa4P06798 Gm38205-201ENSMUST00000192243 258 ntBASIC18.99■□□□□ 0.63
Hoxa4P06798 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.99■□□□□ 0.63
Hoxa4P06798 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa4P06798 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa4P06798 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Hoxa4P06798 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa4P06798 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.98■□□□□ 0.63
Hoxa4P06798 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.98■□□□□ 0.63
Hoxa4P06798 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.98■□□□□ 0.63
Hoxa4P06798 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.98■□□□□ 0.63
Hoxa4P06798 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa4P06798 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa4P06798 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa4P06798 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa4P06798 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxa4P06798 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa4P06798 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa4P06798 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.97■□□□□ 0.63
Hoxa4P06798 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms