Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
P06344 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06344 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P06344 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P06344 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
P06344 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P06344 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06344 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.2■□□□□ 0.34
P06344 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P06344 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.2■□□□□ 0.34
P06344 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
P06344 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06344 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06344 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
P06344 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06344 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
P06344 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
P06344 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.19■□□□□ 0.34
P06344 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P06344 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06344 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
P06344 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06344 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06344 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.18■□□□□ 0.34
P06344 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.18■□□□□ 0.34
P06344 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.18■□□□□ 0.34
P06344 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P06344 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.18■□□□□ 0.34
P06344 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
P06344 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P06344 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.17■□□□□ 0.34
P06344 Gm42642-201ENSMUST00000200683 355 ntBASIC17.17■□□□□ 0.34
P06344 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P06344 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06344 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.16■□□□□ 0.34
P06344 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.16■□□□□ 0.34
P06344 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
P06344 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.16■□□□□ 0.34
P06344 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.16■□□□□ 0.34
P06344 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.16■□□□□ 0.34
P06344 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
P06344 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.16■□□□□ 0.34
P06344 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06344 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
P06344 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Gm9988-201ENSMUST00000069786 435 ntBASIC17.15■□□□□ 0.34
P06344 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.15■□□□□ 0.34
P06344 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P06344 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.15■□□□□ 0.34
P06344 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P06344 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P06344 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.34
P06344 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
P06344 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P06344 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
P06344 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P06344 Gm26571-201ENSMUST00000181399 666 ntBASIC17.14■□□□□ 0.33
P06344 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P06344 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
P06344 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P06344 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
P06344 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
P06344 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms